getExperimentSamplesRawData: getExperimentSamplesRawData - Gets raw data for an experiment...

In ceparman/Core5.3: Core API fucntions

Description

getExperimentSamplesRawData Gets raw data for a experiment container identified by barcode.

Usage

getExperimentSamplesRawData(coreApi, experimentContainerBarcode,
  useVerbose = FALSE)

Arguments

coreApi	coreApi object with valid jsessionid
experimentContainerBarcode	experiment sample container of entity to get
useVerbose	TRUE or FALSE to indicate if verbose options should be used in http call
experimentType	experiment type for sample
assayType	assay type for sample
dataName	assay data name to retrive as configured in the assay.

Details

getExperimentSamplesRawData Gets raw data for a experiment container identified by barcode.

Value

returns a list $entity contains data frame with derived experiment sample barcodes concentration, and assay raw data. $response contains the entire http response

Author(s)

Craig Parman ngsAnalytics, ngsanalytics.com

Examples

## Not run: 
api<-CoreAPIV2::CoreAPI("PATH TO JSON FILE")
login<- CoreAPIV2::authBasic(api)
response<-  getExperimentSamplesRawData (login$coreApi,"ExperimentContainerBarcode",useVerbose = FALSE)
rawdata <- response$entity
CoreAPIV2:logOut(login$coreApi)

## End(Not run)

ceparman/Core5.3 documentation built on May 7, 2019, 8:16 a.m.