Description Usage Arguments References
Calculation of new proposal standard deviation for the random effects
1 2 | ad.propSd_random(chain, propSd, iteration, lower = 0.3, upper = 0.6,
delta.n = function(n) min(0.1, 1/sqrt(n)))
|
chain |
matrix of Markov chain samples |
propSd |
old proposal standard deviation |
iteration |
number of current iteration |
lower |
lower bound |
upper |
upper bound |
delta.n |
function for adding/subtracting from the log propSd |
Rosenthal, J. S. (2011). Optimal proposal distributions and adaptive MCMC. Handbook of Markov Chain Monte Carlo, 93-112.
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