View source: R/fct_normalizeSpectrumIntensity.R
normalizeSpectrumIntensity | R Documentation |
Smooth, remove baseline, and normalize intensity of a spectrum
normalizeSpectrumIntensity(
spectrum,
smoothIntensityMethod = "SavitzkyGolay",
removeBaselineMethod = "TopHat",
calibrateIntensityMethod = "median",
transformIntensityMethod = "sqrt",
halfWindowSize = 20L
)
spectrum |
MALDIquant spectrum |
smoothIntensityMethod |
see ?MALDIquant::smoothIntensity |
removeBaselineMethod |
see ?MALDIquant::smoothIntensity |
calibrateIntensityMethod |
see ?MALDIquant::calibrateIntensityMethod |
transformIntensityMethod |
see ?MALDIquant::transformIntensity |
halfWindowSize |
half window size. The resulting
window reaches from |
MALDIquant mass spectrum
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