peakBinner: Peak List Binner

In chasemc/ghosts: Protein and small molecule analysis of bacteria by MALDI-TOF MS

Description

Peak List Binner

Usage

peakBinner(massStart, massEnd, ppm, massList, intensityList)

Arguments

massStart	beginning of mass range (as of now, must be smaller than smallest mass)
massEnd	end of mass range (as of now, must be smaller than smallest mass)
ppm	ppm tolerance
massList	list of mass vectors (eg list(1:10, 1:10))
intensityList	list of intesity vectors (eg list(1:10, 1:10))

Value

matrix where rows are samples and columns are variables (m/z preojections)

Examples

## Not run: 
masses <- list(Sample_A = c(5000,6000,7000), Sample_B = c(5000,6010,7005), Sample_C = c(5000,6010,7005))  
intensities <- list(Sample_A = rep(1, 3), Sample_B = rep(1, 3), Sample_C = rep(1, 3))
zx <- binnR(massStart = 3000,
            massEnd = 15000,
            ppm = 500,
            massList = masses,
            intensityList = intensities)
            
## End(Not run)

chasemc/ghosts documentation built on May 8, 2019, 12:50 a.m.