Files in chjackson/msm
Multi-State Markov and Hidden Markov Models in Continuous Time

.Rbuildignore
.gitignore
ChangeLog
DESCRIPTION
NAMESPACE
R/boot.R R/constants.R R/draic.R R/hmm-dists.R R/hmm.R R/msm.R R/mstate.R R/olddata.R R/optim.R R/outputs.R R/pearson.R R/phase.R R/simul.R R/utils.R README.md
TODO
data/bos3.rda
data/bos4.rda
data/msmdata.rda
inst/CITATION
inst/NEWS
man/2phase.Rd man/MatrixExp.Rd man/aneur.Rd man/boot.msm.Rd man/bos.Rd man/cav.Rd man/cmodel.object.Rd man/coef.msm.Rd man/crudeinits.msm.Rd man/deltamethod.Rd man/draic.msm.Rd man/ecmodel.object.Rd man/efpt.msm.Rd man/ematrix.msm.Rd man/emodel.object.Rd man/fev.Rd man/hazard.msm.Rd man/hmm-dists.Rd man/hmmMV.Rd man/hmodel.object.Rd man/logLik.msm.Rd man/lrtest.msm.Rd man/medists.Rd man/model.frame.msm.Rd man/msm.Rd man/msm.form.qoutput.Rd man/msm.object.Rd man/msm2Surv.Rd man/odds.msm.Rd man/paramdata.object.Rd man/pearson.msm.Rd man/pexp.Rd man/phasemeans.msm.Rd man/plot.msm.Rd man/plot.prevalence.msm.Rd man/plot.survfit.msm.Rd man/plotprog.msm.Rd man/pmatrix.msm.Rd man/pmatrix.piecewise.msm.Rd man/pnext.msm.Rd man/ppass.msm.Rd man/prevalence.msm.Rd man/print.msm.Rd man/printold.msm.Rd man/psor.Rd man/qcmodel.object.Rd man/qgeneric.Rd man/qmatrix.msm.Rd man/qmodel.object.Rd man/qratio.msm.Rd man/recreate.olddata.Rd man/scoreresid.msm.Rd man/sim.msm.Rd man/simfitted.msm.Rd man/simmulti.msm.Rd man/sojourn.msm.Rd man/statetable.msm.Rd man/summary.msm.Rd man/surface.msm.Rd man/tnorm.Rd man/totlos.msm.Rd man/transient.msm.Rd man/updatepars.msm.Rd man/viterbi.msm.Rd
src/Makevars
src/analyticp.c
src/expm.h
src/hmm.c
src/hmm.h
src/hmmderiv.c
src/lik.c
src/msm-init.c
src/msm.h
src/pijt.c
tests/slow/helper.r tests/slow/localdata.r tests/slow/test_draic.r tests/slow/test_fits.r tests/slow/test_fits_hmm.r tests/slow/test_fits_hmmmulti.r tests/slow/test_fits_misc.r tests/slow/test_outputs_boot.r tests/slow/test_outputs_slow.r tests/slow/test_phase.r tests/test_base.R tests/testthat/helper.r tests/testthat/test_analyticp.r tests/testthat/test_datasumm.r tests/testthat/test_deriv.r tests/testthat/test_models.r tests/testthat/test_models_hmm.r tests/testthat/test_models_hmmmulti.r tests/testthat/test_models_misc.r tests/testthat/test_utils.r
vignettes/Sweave-local.sty
vignettes/figures/dags/p2q1.odg
vignettes/figures/dags/p2q1.pdf
vignettes/figures/dags/p2q1.ps
vignettes/figures/dags/p2q12.odg
vignettes/figures/dags/p2q12.pdf
vignettes/figures/dags/p2q12.ps
vignettes/figures/dags/p3q12.odg
vignettes/figures/dags/p3q12.pdf
vignettes/figures/dags/p3q12.ps
vignettes/figures/dags/p3q124.odg
vignettes/figures/dags/p3q124.pdf
vignettes/figures/dags/p3q124.ps
vignettes/figures/dags/p3q1246.odg
vignettes/figures/dags/p3q1246.pdf
vignettes/figures/dags/p3q1246.ps
vignettes/figures/dags/p3q135.odg
vignettes/figures/dags/p3q135.pdf
vignettes/figures/dags/p3q135.ps
vignettes/figures/dags/p3q14.odg
vignettes/figures/dags/p3q14.pdf
vignettes/figures/dags/p3q14.ps
vignettes/figures/dags/p3q16.odg
vignettes/figures/dags/p3q16.pdf
vignettes/figures/dags/p3q16.ps
vignettes/figures/dags/p4q13569.odg
vignettes/figures/dags/p4q13569.pdf
vignettes/figures/dags/p4q13569.ps
vignettes/figures/dags/p4q159.odg
vignettes/figures/dags/p4q159.pdf
vignettes/figures/dags/p4q159.ps
vignettes/figures/dags/p5q1_4_6_8_11_12_16.odg
vignettes/figures/dags/p5q1_4_6_8_11_12_16.pdf
vignettes/figures/dags/p5q1_4_6_8_11_12_16.ps
vignettes/figures/dags/p5q1_6_11_16.odg
vignettes/figures/dags/p5q1_6_11_16.pdf
vignettes/figures/dags/p5q1_6_11_16.ps
vignettes/figures/dags/p5q1_6_7_11_12.odg
vignettes/figures/dags/p5q1_6_7_11_12.pdf
vignettes/figures/dags/p5q1_6_7_11_12.ps
vignettes/figures/fev_viterbi.pdf
vignettes/figures/general.eps
vignettes/figures/general.pdf vignettes/figures/hidden.pdf
vignettes/figures/hidden.ps
vignettes/figures/illdeath.eps
vignettes/figures/illdeath.pdf
vignettes/figures/multistate.eps
vignettes/figures/multistate.pdf
vignettes/figures/p2q1.eps
vignettes/figures/p2q1.pdf
vignettes/figures/p2q12.eps
vignettes/figures/p2q12.pdf
vignettes/figures/p3q12.eps
vignettes/figures/p3q12.pdf
vignettes/figures/p3q124.eps
vignettes/figures/p3q124.pdf
vignettes/figures/p3q1246.eps
vignettes/figures/p3q1246.pdf
vignettes/figures/p3q135.eps
vignettes/figures/p3q135.pdf
vignettes/figures/p3q14.eps
vignettes/figures/p3q14.pdf
vignettes/figures/p3q16.eps
vignettes/figures/p3q16.pdf
vignettes/figures/p4q13569.eps
vignettes/figures/p4q13569.pdf
vignettes/figures/p4q159.eps
vignettes/figures/p4q159.pdf
vignettes/figures/p5q1_4_6_8_11_12_16.eps
vignettes/figures/p5q1_4_6_8_11_12_16.pdf
vignettes/figures/p5q1_6_11_16.eps
vignettes/figures/p5q1_6_11_16.pdf
vignettes/figures/p5q1_6_7_11_12.eps
vignettes/figures/p5q1_6_7_11_12.pdf vignettes/figures/sampling.pdf
vignettes/figures/sampling.ps
vignettes/msm-manual.Rnw
vignettes/msm.bib
chjackson/msm documentation built on Dec. 8, 2017, 8:20 p.m.