best.models: Best models
In chr1swallace/GUESSFM: Using GUESS for Fine Mapping
Description
Usage
Arguments
Details
Value
Author(s)
Description
Display most likely models according to their posterior probability
Usage
1
best.models(d, pp.thr = 0.01, cpp.thr = NA)
Arguments
d
snpmod object or a list of snpmod objects
pp.thr
models with PP>pp.thr will be shown
cpp.thr
the smallest set of models such that sum(PP)>=cpp.thr will be shown
Details
Note that this isn't posterior probability in the true sense, it is the posterior probability for each model amongst the bag of models in the snpmod object, d.
Value
subset of models slot in d showing best models
Author(s)
chris
chr1swallace/GUESSFM documentation built on May 13, 2019, 6:17 p.m.
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Description Usage Arguments Details Value Author(s)
Description
Display most likely models according to their posterior probability
Usage
1 | best.models(d, pp.thr = 0.01, cpp.thr = NA)
|
Arguments
d |
snpmod object or a list of snpmod objects |
pp.thr |
models with PP>pp.thr will be shown |
cpp.thr |
the smallest set of models such that sum(PP)>=cpp.thr will be shown |
Details
Note that this isn't posterior probability in the true sense, it is the posterior probability for each model amongst the bag of models in the snpmod object, d.
Value
subset of models slot in d showing best models
Author(s)
chris
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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