API for cjubin/learnMET
Predictions with Machine Learning methods in Multi Environment Trials (MET)
| Global functions | |
|---|---|
| %>% | Man page |
| ALE_plot_split | Man page Source code |
| DL_reg_1 | Man page Source code |
| DL_reg_2 | Man page Source code |
| DL_reg_3 | Man page Source code |
| analysis_predictions | Man page Source code |
| apply_pca | Man page Source code |
| apply_pcs_G_Add | Man page Source code |
| climate_variables_indica | Man page |
| climate_variables_japonica | Man page |
| clustering_env_data | Man page Source code |
| compute_EC_fixed_length_window | Man page Source code |
| compute_EC_fixed_number_windows | Man page Source code |
| compute_EC_gdd | Man page Source code |
| compute_EC_monthly | Man page Source code |
| compute_EC_user_defined_intervals | Man page Source code |
| create_METData | Man page Source code |
| daylength | Man page Source code |
| dtw_distance | Man page Source code |
| extraterrestrial_rad | Source code |
| fit_cv_split | Man page Source code |
| fit_cv_split.DL_reg_1 | Man page Source code |
| fit_cv_split.DL_reg_2 | Man page Source code |
| fit_cv_split.DL_reg_3 | Man page Source code |
| fit_cv_split.default | Man page Source code |
| fit_cv_split.rf_reg_1 | Man page Source code |
| fit_cv_split.rf_reg_2 | Man page Source code |
| fit_cv_split.rf_reg_3 | Man page Source code |
| fit_cv_split.stacking_reg_1 | Man page Source code |
| fit_cv_split.stacking_reg_2 | Man page |
| fit_cv_split.stacking_reg_3 | Man page |
| fit_cv_split.xgb_reg_1 | Man page Source code |
| fit_cv_split.xgb_reg_2 | Man page Source code |
| fit_cv_split.xgb_reg_3 | Man page Source code |
| fit_split | Man page Source code |
| fit_split.DL_reg_1 | Man page Source code |
| fit_split.DL_reg_2 | Man page Source code |
| fit_split.DL_reg_3 | Man page Source code |
| fit_split.default | Man page Source code |
| fit_split.rf_reg_1 | Man page Source code |
| fit_split.rf_reg_2 | Man page Source code |
| fit_split.rf_reg_3 | Man page Source code |
| fit_split.stacking_reg_1 | Man page Source code |
| fit_split.stacking_reg_2 | Man page |
| fit_split.stacking_reg_3 | Man page |
| fit_split.xgb_reg_1 | Man page Source code |
| fit_split.xgb_reg_2 | Man page Source code |
| fit_split.xgb_reg_3 | Man page Source code |
| gdd_information | Man page Source code |
| geno_G2F | Man page |
| geno_indica | Man page |
| geno_japonica | Man page |
| get.ea | Man page Source code |
| get.ea.no.RH | Man page Source code |
| get.ea.with.rhmax | Man page Source code |
| get.ea.with.rhmean | Man page Source code |
| get.es | Man page Source code |
| get.esmn | Man page Source code |
| get.esmx | Man page Source code |
| get_ECs | Man page Source code |
| get_daily_tables_per_env | Man page Source code |
| get_elevation | Man page Source code |
| get_soil_per_env | Man page Source code |
| get_solar_radiation | Man page Source code |
| get_splits_processed_with_method | Man page Source code |
| get_wind_data | Man page Source code |
| info_environments_G2F | Man page |
| info_environments_indica | Man page |
| info_environments_japonica | Man page |
| intervals_growth_manual_G2F | Man page |
| map_G2F | Man page |
| map_indica | Man page |
| map_japonica | Man page |
| marker_effect_per_env_EN | Man page Source code |
| marker_effect_per_env_FarmCPU | Man page Source code |
| new_DL_reg_1 | Man page Source code |
| new_DL_reg_2 | Man page Source code |
| new_DL_reg_3 | Man page Source code |
| new_create_METData | Man page Source code |
| new_rf_reg_1 | Man page Source code |
| new_rf_reg_2 | Man page Source code |
| new_rf_reg_3 | Man page Source code |
| new_stacking_reg_1 | Man page Source code |
| new_stacking_reg_2 | Man page Source code |
| new_stacking_reg_3 | Man page Source code |
| new_xgb_reg_1 | Man page Source code |
| new_xgb_reg_2 | Man page Source code |
| new_xgb_reg_3 | Man page Source code |
| penman_monteith_reference_et0 | Man page Source code |
| permutation_based_vip | Man page Source code |
| pheno_G2F | Man page |
| pheno_indica | Man page |
| pheno_japonica | Man page |
| plot_results_cv | Man page Source code |
| plot_results_vip | Man page Source code |
| plot_results_vip_cv | Man page Source code |
| predict_cv0 | Man page Source code |
| predict_cv00 | Man page Source code |
| predict_cv00_5folds | Man page Source code |
| predict_cv1 | Man page Source code |
| predict_cv2 | Man page Source code |
| predict_trait_MET | Man page Source code |
| predict_trait_MET_cv | Man page Source code |
| print.summary.METData | Man page Source code |
| qc_raw_weather_data | Man page Source code |
| rf_reg_1 | Man page Source code |
| rf_reg_2 | Man page Source code |
| rf_reg_3 | Man page Source code |
| sat_vap_pressure | Man page Source code |
| select_markers | Man page Source code |
| snp_based_haploblocks | Source code |
| soil_G2F | Man page |
| stacking_reg_1 | Man page Source code |
| stacking_reg_2 | Man page Source code |
| stacking_reg_3 | Man page Source code |
| summary.METData | Man page Source code |
| validate_DL_reg_1 | Man page Source code |
| validate_DL_reg_2 | Man page Source code |
| validate_DL_reg_3 | Man page Source code |
| validate_create_METData | Man page Source code |
| validate_rf_reg_1 | Man page Source code |
| validate_rf_reg_2 | Man page Source code |
| validate_rf_reg_3 | Man page Source code |
| validate_stacking_reg_1 | Man page Source code |
| validate_stacking_reg_2 | Man page Source code |
| validate_stacking_reg_3 | Man page Source code |
| validate_xgb_reg_1 | Man page Source code |
| validate_xgb_reg_2 | Man page Source code |
| validate_xgb_reg_3 | Man page Source code |
| variable_importance_split | Man page Source code |
| variable_importance_split.default | Man page Source code |
| variable_importance_split.fitted_DL_reg_1 | Man page Source code |
| variable_importance_split.fitted_DL_reg_2 | Man page Source code |
| variable_importance_split.fitted_rf_reg_1 | Man page Source code Source code |
| variable_importance_split.fitted_rf_reg_2 | Man page Source code Source code |
| variable_importance_split.fitted_stacking_reg_1 | Man page Source code |
| variable_importance_split.fitted_stacking_reg_2 | Man page Source code |
| variable_importance_split.fitted_stacking_reg_3 | Man page Source code |
| variable_importance_split.fitted_xgb_reg_1 | Man page Source code |
| variable_importance_split.fitted_xgb_reg_2 | Man page Source code |
| xgb_reg_1 | Man page Source code |
| xgb_reg_2 | Man page Source code |
| xgb_reg_3 | Man page Source code |
