Files in clatworthylab/bowerbird
A single-cell package for Functional Annotation + Gene Module Summarization.
.Rbuildignore
.gitattributes
.github/workflows/r.yml
.github/workflows/vignette.yml
.gitignore
DESCRIPTION
NAMESPACE
R/bower.R
R/classes.R
R/cluster.R
R/enrich_genesets.R
R/extract_core.R
R/generics.R
R/graph.R
R/io.R
R/plot.R
R/read_geneset.R
R/summarize_clusters.R
R/utilities.R
README.md
codecov.yml
environment.yml
img/logo.png
inst/extdata/c5.go.bp.v7.4.symbols.gmt
inst/extdata/h.all.v7.4.symbols.csv
inst/extdata/h.all.v7.4.symbols.gmt
inst/extdata/h.all.v7.4.symbols.gmx
inst/extdata/h.all.v7.4.symbols.tsv
man/BOWER.Rd
man/BOWER_class.Rd
man/enrich_genesets.Rd
man/extract_core.Rd
man/find_clusters.Rd
man/plot_graph.Rd
man/read_geneset.Rd
man/set_clusters.Rd
man/snn_graph.Rd
man/summarize_clusters.Rd
tests/testthat.R
tests/testthat/test_enrich.R
tests/testthat/test_io.R
tests/testthat/test_simple.R
vignettes/bowerbird_vignette.rmd
