Files in cmap/cmapR
CMap Tools in R
.dockerignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/GCT.R
R/data.R
R/deprecated.R
R/io.R
R/math.R
R/utils.R
README.md
data/cdesc_char.RData
data/ds.RData
data/gene_set.RData
data/kd_gct.RData
docker/Dockerfile
docker/nginx.conf
docs/Makefile
docs/build/doctrees/available_modules.doctree
docs/build/doctrees/build.doctree
docs/build/doctrees/citing.doctree
docs/build/doctrees/contributing.doctree
docs/build/doctrees/data.doctree
docs/build/doctrees/environment.pickle
docs/build/doctrees/faq.doctree
docs/build/doctrees/index.doctree
docs/build/doctrees/io.doctree
docs/build/doctrees/licenses.doctree
docs/build/doctrees/utils.doctree
docs/build/html/.buildinfo
docs/build/html/_sources/available_modules.txt
docs/build/html/_sources/build.txt
docs/build/html/_sources/citing.txt
docs/build/html/_sources/contributing.txt
docs/build/html/_sources/data.txt
docs/build/html/_sources/faq.txt
docs/build/html/_sources/index.txt
docs/build/html/_sources/io.txt
docs/build/html/_sources/licenses.txt
docs/build/html/_sources/utils.txt
docs/build/html/_static/ajax-loader.gif
docs/build/html/_static/basic.css
docs/build/html/_static/comment-bright.png
docs/build/html/_static/comment-close.png
docs/build/html/_static/comment.png
docs/build/html/_static/css/badge_only.css
docs/build/html/_static/css/theme.css
docs/build/html/_static/doctools.js
docs/build/html/_static/down-pressed.png
docs/build/html/_static/down.png
docs/build/html/_static/file.png
docs/build/html/_static/fonts/Inconsolata-Bold.ttf
docs/build/html/_static/fonts/Inconsolata-Regular.ttf
docs/build/html/_static/fonts/Lato-Bold.ttf
docs/build/html/_static/fonts/Lato-Regular.ttf
docs/build/html/_static/fonts/RobotoSlab-Bold.ttf
docs/build/html/_static/fonts/RobotoSlab-Regular.ttf
docs/build/html/_static/fonts/fontawesome-webfont.eot
docs/build/html/_static/fonts/fontawesome-webfont.svg
docs/build/html/_static/fonts/fontawesome-webfont.ttf
docs/build/html/_static/fonts/fontawesome-webfont.woff
docs/build/html/_static/jquery-1.11.1.js
docs/build/html/_static/jquery.js
docs/build/html/_static/js/modernizr.min.js
docs/build/html/_static/js/theme.js
docs/build/html/_static/minus.png
docs/build/html/_static/plus.png
docs/build/html/_static/pygments.css
docs/build/html/_static/searchtools.js
docs/build/html/_static/underscore-1.3.1.js
docs/build/html/_static/underscore.js
docs/build/html/_static/up-pressed.png
docs/build/html/_static/up.png
docs/build/html/_static/websupport.js
docs/build/html/available_modules.html
docs/build/html/build.html
docs/build/html/citing.html
docs/build/html/contributing.html
docs/build/html/data.html
docs/build/html/faq.html
docs/build/html/genindex.html
docs/build/html/index.html
docs/build/html/io.html
docs/build/html/licenses.html
docs/build/html/objects.inv
docs/build/html/search.html
docs/build/html/searchindex.js
docs/build/html/utils.html
docs/source/available_modules.rst
docs/source/build.rst
docs/source/citing.rst
docs/source/conf.py
docs/source/contributing.rst
docs/source/data.rst
docs/source/faq.rst
docs/source/index.rst
docs/source/io.rst
docs/source/licenses.rst
docs/source/utils.rst
inst/extdata/example.lxb
inst/extdata/lm_epsilon_n978.grp
inst/extdata/lm_probes.gmx
inst/extdata/modzs_n25x50.gct
inst/extdata/modzs_n25x50.gctx
inst/extdata/query_up.gmt
inst/script/data.txt
install_cmapR.R
man/GCT-class.Rd
man/GCT.Rd
man/align_matrices.Rd
man/annotate_gct.Rd
man/append_dim.Rd
man/cdesc_char.Rd
man/check_colnames.Rd
man/check_dups.Rd
man/distil.Rd
man/ds.Rd
man/extract_gct.Rd
man/fix_datatypes.Rd
man/gene_set.Rd
man/ids.Rd
man/is.wholenumber.Rd
man/kd_gct.Rd
man/lxb2mat.Rd
man/mat.Rd
man/melt_gct.Rd
man/merge_gct.Rd
man/merge_with_precedence.Rd
man/meta.Rd
man/na_pad_matrix.Rd
man/parse_gctx.Rd
man/parse_gmt.Rd
man/parse_gmx.Rd
man/parse_grp.Rd
man/process_ids.Rd
man/rank_gct.Rd
man/read_gctx_ids.Rd
man/read_gctx_meta.Rd
man/robust_zscore.Rd
man/subset_gct.Rd
man/subset_to_ids.Rd
man/threshold.Rd
man/transpose_gct.Rd
man/update_gctx.Rd
man/write_gct.Rd
man/write_gctx.Rd
man/write_gctx_meta.Rd
man/write_gmt.Rd
man/write_grp.Rd
man/write_tbl.Rd
tests/testthat.R
tests/testthat/arr3d.rds
tests/testthat/distil_result.rds
tests/testthat/extract.gct.res.rds
tests/testthat/matrices.rds
tests/testthat/rnorm20.rds
tests/testthat/rnorm_matrix.rds
tests/testthat/robust_zs_rnorm20.rds
tests/testthat/test_0.1_GCT.R
tests/testthat/test_0.2_io.R
tests/testthat/test_1_utils.R
tests/testthat/test_3_math.R
tests/testthat/test_GCT_class.R
tests/testthat/test_cdesc.txt
tests/testthat/test_deprecated.R
tests/testthat/test_n5x10.gct
tests/testthat/test_n5x10.gctx
vignettes/tutorial.Rmd
