cmap/cmapR: CMap Tools in R

The Connectivity Map (CMap) is a massive resource of perturbational gene expression profiles built by researchers at the Broad Institute and funded by the NIH Library of Integrated Network-Based Cellular Signatures (LINCS) program. Please visit https://clue.io for more information. The cmapR package implements methods to parse, manipulate, and write common CMap data objects, such as annotated matrices and collections of gene sets.

Getting started

Package details

Bioconductor views DataImport DataRepresentation GeneExpression
Maintainer
Licensefile LICENSE
Version1.5.3
URL https://github.com/cmap/cmapR
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("cmap/cmapR")
cmap/cmapR documentation built on Oct. 14, 2021, 12:51 a.m.