comp_enrichment: Calculate the enrichment within an ordered list of verticies.

In cnobles/spraphal: Sparse Graph-based Analysis

Description

Calculate the enrichment within an ordered list of verticies.

Usage

comp_enrichment(v, G, d = 50, f = 100, e = NULL, exact = TRUE)

Arguments

v	vector of vertex identifiers. Vertices must be present in graph G.
G	igraph object representing the graph and including vertices from v.
d	delta or change distance for which to look for enrichment. Default 20.
f	forward threshold for reference enrichment. Default 100.
e	edge window to consider at the beginning. If not specified, the default value will be equal to the delta 'd'.
exact	logical. If TRUE, the approximation of the probability is calculated rather than approximated by 'ppois()'.

Author(s)

Christopher Nobles, Ph.D.

cnobles/spraphal documentation built on May 28, 2019, 7:35 p.m.