prune_by_enrich: Prune vertices from vertex list based on p-value cutoff /...
In cnobles/spraphal: Sparse Graph-based Analysis
Description
Usage
Arguments
Author(s)
Description
Prune vertices from vertex list based on p-value cutoff / enrichment
Usage
1
prune_by_enrich(G, v, cutoff, collect = FALSE)
Arguments
G
igraph which contains vertex identifiers present in 'v'.
v
vector of vertex identifiers to be considered for pruning.
cutoff
numeric. Cutoff enrichment value (p-value) for which to prune
vertices from the list.
collect
logical. If TRUE, the output will contain a listed object with
the names of 'pruned_list' and 'removed_vertices'.
Author(s)
Christopher Nobles, Ph.D.
cnobles/spraphal documentation built on May 28, 2019, 7:35 p.m.
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Description Usage Arguments Author(s)
Description
Prune vertices from vertex list based on p-value cutoff / enrichment
Usage
1 | prune_by_enrich(G, v, cutoff, collect = FALSE)
|
Arguments
G |
igraph which contains vertex identifiers present in 'v'. |
v |
vector of vertex identifiers to be considered for pruning. |
cutoff |
numeric. Cutoff enrichment value (p-value) for which to prune vertices from the list. |
collect |
logical. If TRUE, the output will contain a listed object with the names of 'pruned_list' and 'removed_vertices'. |
Author(s)
Christopher Nobles, Ph.D.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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