fold_change_plot: Fold change plot

In computational-metabolomics/structtoolbox: Data processing & analysis tools for Metabolomics and other omics

Fold change plot

Description

A plot of fold changes calculated for a chosen subset of features. A predefined fold change threshold is indicated by shaded regions.

Usage

fold_change_plot(number_features = 20, orientation = "portrait", ...)

Arguments

number_features	(numeric) The number randomly selected features to plot, or a list of column numbers. The default is 20.
orientation	(character) Plot orientation. Allowed values are limited to the following: "landscape": Features are plotted on the y-axis. "portrait": Features are plotted on the x-axis. The default is "portrait".
...	Additional slots and values passed to struct_class.

Value

A fold_change_plot object. This object has no output slots. See chart_plot in the struct package to plot this chart object.

Inheritance

A fold_change_plot object inherits the following struct classes:

⁠[fold_change_plot]⁠ >> ⁠[chart]⁠ >> ⁠[struct_class]⁠

Examples

M = fold_change_plot(
      number_features = 10,
      orientation = "portrait")

C = fold_change_plot()

computational-metabolomics/structtoolbox documentation built on July 2, 2024, 10:46 p.m.