Files in computational-metabolomics/structtoolbox
Some tools bult using the struct package

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/HSDEM_class.R R/HSD_class.R R/PCA_class.R R/PCA_plotfcns.R R/PLSDA_charts.R R/PLSDA_class.R R/PLSFC_class.R R/PLSR_class.R R/anova_class.R R/autoscale_class.R R/balanced_accuracy_class.R R/blank_filter_class.R R/classical_lsq_class.R R/confounders_clsq_class.R R/corr_coef_class.R R/d_ratio_filter_class.R R/dataset_chart_classes.R R/factor_barchart_class.R R/feature_profile_class.R R/filter_by_name_class.R R/filter_na_count.R R/filter_smeta_class.R R/fisher_exact_class.R R/fold_change_class.R R/fold_change_int_class.R R/forward_selection_by_rank_class.R R/ggplot_theme_pub.R R/glog_class.R R/grid_search_1d_class.R R/hca_class.R R/kfold_xval_charts.R R/kfold_xval_class.R R/knn_impute_class.R R/kw_rank_sum_class.R R/linear_model_class.R R/log_transform.R R/mean_centre_class.R R/mixed_effect_class.R R/mv_feature_filter_class.R R/mv_sample_filter_class.R R/pairs_filter_class.R R/permutation_test_class.R R/permute_sample_order_class.R R/pqn_norm_method_class.R R/prop_na_class.R R/r_squared_class.R R/rsd_filter.R R/sb_corr.R R/sbcms_dataset_class.R R/split_data_class.R R/structToolbox.R
R/sysdata.rda
R/tSNE_class.R R/ttest_class.R R/vec_norm_class.R R/wilcox_test_class.R
README.rst
appveyor.yml
binder/environment.yml
codecov.yml
doc/iterator_example.R doc/method_example.R doc/model_example.R man/ANOVA-class.Rd man/HCA-class.Rd man/HSD-class.Rd man/HSDEM-class.Rd man/PCA-class.Rd man/PCA.dstat-class.Rd man/PCA.scree-class.Rd man/PLSDA-class.Rd man/PLSFC-class.Rd man/PLSR-class.Rd man/autoscale-class.Rd man/balanced_accuracy-class.Rd man/blank_filter-class.Rd man/blank_filter.hist-class.Rd man/chart.plot-gs_line-grid_search_1d-method.Rd man/classical_lsq-class.Rd man/compare_dist-class.Rd man/confounders_clsq-class.Rd man/confounders_lsq.barchart-class.Rd man/confounders_lsq.boxplot-class.Rd man/corr_coef-class.Rd man/dataset.boxplot-class.Rd man/dataset.dist-class.Rd man/dataset.factor_barchart-class.Rd man/dataset.heatmap-class.Rd man/dratio_filter-class.Rd man/feature_boxplot-class.Rd man/feature_profile-class.Rd man/filter_by_name-class.Rd man/filter_na_count-class.Rd man/filter_smeta-class.Rd man/fisher_exact-class.Rd man/fold_change-class.Rd man/fold_change_int-class.Rd man/fold_change_plot-class.Rd man/forward_selection_byrank-class.Rd man/fs_line-class.Rd man/glog_transform-class.Rd man/grid_search_1d-class.Rd man/gs_line-class.Rd man/hca_dendrogram-class.Rd man/kfold_xval-class.Rd man/kfoldxcv_grid-class.Rd man/kfoldxcv_metric-class.Rd man/knn_impute-class.Rd man/kw_p_hist-class.Rd man/kw_rank_sum-class.Rd man/linear_model-class.Rd man/log_transform-class.Rd man/mean_centre-class.Rd man/mixed_effect-class.Rd man/mv_boxplot-class.Rd man/mv_feature_filter-class.Rd man/mv_feature_filter.hist-class.Rd man/mv_histogram-class.Rd man/mv_sample_filter-class.Rd man/mv_sample_filter.hist-class.Rd man/pairs_filter-class.Rd man/pca_biplot_plot-class.Rd man/pca_correlation_plot-class.Rd man/pca_loadings_plot-class.Rd man/pca_scores_plot-class.Rd man/permutation_test-class.Rd man/permutation_test.boxplot-class.Rd man/permutation_test.hist-class.Rd man/permutation_test.scatter-class.Rd man/permutation_test.violin-class.Rd man/permute_sample_order-class.Rd man/plsda_scores_plot-class.Rd man/plsr_cook_dist-class.Rd man/plsr_prediction_plot-class.Rd man/plsr_qq_plot-class.Rd man/plsr_residual_hist-class.Rd man/pqn_norm-class.Rd man/pqn_norm.hist-class.Rd man/prop_na-class.Rd man/r_squared-class.Rd man/rsd_filter-class.Rd man/rsd_filter.hist-class.Rd man/sb_corr-class.Rd man/sbcms_dataset.Rd man/split_data-class.Rd man/structToolbox.Rd man/tSNE-class.Rd man/tSNE_scatter-class.Rd man/ttest-class.Rd man/vec_norm-class.Rd man/wilcox_p_hist-class.Rd man/wilcox_test-class.Rd
notebooks/iterator_example.ipynb
notebooks/method_example.ipynb
notebooks/model_example.ipynb
structtoolbox.Rproj
tests/testthat.R tests/testthat/test-anova.R tests/testthat/test-autoscale.R tests/testthat/test-blank-filter.R tests/testthat/test-confounders-lsq.R tests/testthat/test-dataset-charts.R tests/testthat/test-factor-barchart.R tests/testthat/test-filter-by-name.R tests/testthat/test-filter-smeta.R tests/testthat/test-fisher-exact.R tests/testthat/test-glog.R tests/testthat/test-gridsearch1d.R tests/testthat/test-kfold-xval.R tests/testthat/test-knn-impute.R tests/testthat/test-log-transform.R tests/testthat/test-mixed-effects.R tests/testthat/test-mv-feature-filter.R tests/testthat/test-mv-sample-filter.R tests/testthat/test-pca.R tests/testthat/test-permutation_test.R tests/testthat/test-permute-sample-order.R tests/testthat/test-plsda.R tests/testthat/test-plsr.R tests/testthat/test-pqn-norm.R tests/testthat/test-prop-na.R tests/testthat/test-rsd-filter.R tests/testthat/test-split-data.R tests/testthat/test-ttest.R tests/testthat/test-vec-norm.R
vignettes/.gitignore
vignettes/iterator_example.Rmd vignettes/method_example.Rmd vignettes/model_example.Rmd
computational-metabolomics/structtoolbox documentation built on Sept. 18, 2019, 8:32 p.m.