mean_of_medians: Mean of medians

In computational-metabolomics/structtoolbox: Data processing & analysis tools for Metabolomics and other omics

Mean of medians

Description

The data matrix is normalised by the mean of the median of each factor level.

Usage

mean_of_medians(factor_name, ...)

Arguments

factor_name	(character) The name of a sample-meta column to use.
...	Additional slots and values passed to struct_class.

Value

A mean_of_medians object with the following output slots:

transformed	(DatasetExperiment) Data after the tranformation has been applied.

Inheritance

A mean_of_medians object inherits the following struct classes:

⁠[mean_of_medians]⁠ >> ⁠[model]⁠ >> ⁠[struct_class]⁠

Examples

M = mean_of_medians(
      factor_name = "V1")

D = iris_DatasetExperiment()
M = mean_of_medians(factor_name='Species')
M = model_apply(M,D)

computational-metabolomics/structtoolbox documentation built on July 2, 2024, 10:46 p.m.