model_apply: Apply method

In computational-metabolomics/structtoolbox: Data processing & analysis tools for Metabolomics and other omics

Apply method

Description

Applies method to the input DatasetExperiment

Usage

## S4 method for signature 'ANOVA,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'HSD,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'mixed_effect,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'HSDEM,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'classical_lsq,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'confounders_clsq,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'constant_sum_norm,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'corr_coef,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'split_data,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'equal_split,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'filter_smeta,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'fisher_exact,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'fold_change,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'fold_change_int,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'HCA,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'knn_impute,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'kw_rank_sum,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'log_transform,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'mean_of_medians,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'nroot_transform,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'pairs_filter,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'prop_na,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'rsd_filter,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'sb_corr,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'stratified_split,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'tSNE,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'ttest,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'vec_norm,DatasetExperiment'
model_apply(M, D)

## S4 method for signature 'wilcox_test,DatasetExperiment'
model_apply(M, D)

Arguments

M	a method object
D	another object used by the first

Value

Returns a modified method object

Examples

M=model()
model_apply(M,DatasetExperiment())

computational-metabolomics/structtoolbox documentation built on Feb. 9, 2024, 8:19 a.m.