GetOverlappingGenes: Find overlapping genes in single-cell data, bulk data, and...
In cozygene/bisque: Decomposition of Bulk Expression with Single-Cell Sequencing
Description
Usage
Arguments
Value
View source: R/reference_based.R
Description
Find overlapping genes in single-cell data, bulk data, and marker genes
Usage
1
GetOverlappingGenes(sc.eset, bulk.eset, markers, verbose)
Arguments
sc.eset
Expression Set with single-cell data
bulk.eset
Expression Set with bulk data
markers
Character vector. List of relevant marker genes
verbose
Boolean. Print logging info
Value
overlapping.genes Character vector. List of genes found in markers
and both datasets.
cozygene/bisque documentation built on May 28, 2021, 7:57 p.m.
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Description Usage Arguments Value
View source: R/reference_based.R
Description
Find overlapping genes in single-cell data, bulk data, and marker genes
Usage
1 | GetOverlappingGenes(sc.eset, bulk.eset, markers, verbose)
|
Arguments
sc.eset |
Expression Set with single-cell data |
bulk.eset |
Expression Set with bulk data |
markers |
Character vector. List of relevant marker genes |
verbose |
Boolean. Print logging info |
Value
overlapping.genes Character vector. List of genes found in markers and both datasets.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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