Files in crukci-bioinformatics/qPLEXanalyzer
Tools for quantitative proteomics data analysis
.DS_Store
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/IRSnorm.R
R/assignColours.R
R/checkArguments.R
R/coefVar.R
R/computeDiffStats.R
R/convertToMSnset.R
R/corrPlot.R
R/coveragePlot.R
R/getContrastResults.R
R/groupScaling.R
R/hierarchicalPlot.R
R/intensityBoxplot.R
R/intensityPlot.R
R/maVolPlot.R
R/mergePeptides.R
R/mergeSites.R
R/normalizeQuantiles.R
R/normalizeScaling.R
R/pcaPlot.R
R/peptideIntensityPlot.R
R/plotMeanVar.R
R/qPLEXanalyzer-package.R
R/regressIntensity.R
R/rliPlot.R
R/rowScaling.R
R/summarizeIntensities.R
data/ER_ARID1A_KO_MCF7.RData
data/datalist
data/exp2_Xlink.RData
data/exp3_OHT_ESR1.RData
data/human_anno.RData
data/mouse_anno.RData
inst/.DS_Store
inst/CITATION
inst/extdata/P03372.fasta
man/ER_ARID1A_KO_MCF7.Rd
man/IRSnorm.Rd
man/assignColours.Rd
man/coefVar.Rd
man/computeDiffStats.Rd
man/convertToMSnset.Rd
man/corrPlot.Rd
man/coveragePlot.Rd
man/exp2_Xlink.Rd
man/exp3_OHT_ESR1.Rd
man/getContrastResults.Rd
man/groupScaling.Rd
man/hierarchicalPlot.Rd
man/human_anno.Rd
man/intensityBoxplot.Rd
man/intensityPlot.Rd
man/maVolPlot.Rd
man/mergePeptides.Rd
man/mergeSites.Rd
man/mouse_anno.Rd
man/normalizeQuantiles.Rd
man/normalizeScaling.Rd
man/pcaPlot.Rd
man/peptideIntensityPlot.Rd
man/plotMeanVar.Rd
man/qPLEXanalyzer-package.Rd
man/regressIntensity.Rd
man/rliPlot.Rd
man/rowScaling.Rd
man/summarizeIntensities.Rd
vignettes/library.bib
vignettes/qPLEXanalyzer.Rmd
