countsimExample_dfmat: Example list with three count data sets in different formats
In csoneson/countsimQC: Compare Characteristic Features of Count Data Sets
countsimExample_dfmat R Documentation
Example list with three count data sets in different formats
Description
A named list with three elements, each corresponding to a (real or simulated)
count data set. One of them is provided as a DESeqDataset, one as a count
data frame and one as a count matrix.
Usage
countsimExample_dfmat
Format
A named list with three elements, each corresponding to a (real or
simulated) count data set.
Details
The Original data set represents a subset of 10,000 genes and 11 cells
from the GSE74596 single-cell RNA-seq data set, obtained from the conquer
repository (http://imlspenticton.uzh.ch:3838/conquer/). The Sim1 and
Sim2 data sets similarly represent subsets of scRNA-seq data sets
simulated with two different simulation methods, using the real GSE74596 data
set as the basis for parameter estimation.
Value
A named list with three elements, each corresponding to a (real or
simulated) count data set.
csoneson/countsimQC documentation built on Oct. 29, 2023, 2:14 p.m.
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| countsimExample_dfmat | R Documentation |
Example list with three count data sets in different formats
Description
A named list with three elements, each corresponding to a (real or simulated) count data set. One of them is provided as a DESeqDataset, one as a count data frame and one as a count matrix.
Usage
countsimExample_dfmat
Format
A named list with three elements, each corresponding to a (real or simulated) count data set.
Details
The Original data set represents a subset of 10,000 genes and 11 cells
from the GSE74596 single-cell RNA-seq data set, obtained from the conquer
repository (http://imlspenticton.uzh.ch:3838/conquer/). The Sim1 and
Sim2 data sets similarly represent subsets of scRNA-seq data sets
simulated with two different simulation methods, using the real GSE74596 data
set as the basis for parameter estimation.
Value
A named list with three elements, each corresponding to a (real or simulated) count data set.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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