README.md
In cstubben/pmcXML: Tools to parse full text XML documents from PMC Open Access
DEPRECATED. Please use the tidypmc package
pmcXML is an R package to download and parse XML documents from
Pubmed Central (PMC).
Use devtools to install the package
library(devtools)
install_github("cstubben/pmcXML")
The pmcSupp function also requires a number of Unix dependencies (unzip, unoconv, pdftotext)
to read zip, word tables and pdf supplementary files.
Additional details about the package are on the wiki pages and in BMC Bioinformatics.
Stubben, CJ and JC Challacombe, 2014. Mining locus tags in PubMed Central to improve microbial gene annotation. BMC Bioinformatics 15:43.
cstubben/pmcXML documentation built on May 14, 2019, 12:25 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
DEPRECATED. Please use the tidypmc package
pmcXML is an R package to download and parse XML documents from
Pubmed Central (PMC).
Use devtools to install the package
library(devtools)
install_github("cstubben/pmcXML")
The pmcSupp function also requires a number of Unix dependencies (unzip, unoconv, pdftotext)
to read zip, word tables and pdf supplementary files.
Additional details about the package are on the wiki pages and in BMC Bioinformatics.
Stubben, CJ and JC Challacombe, 2014. Mining locus tags in PubMed Central to improve microbial gene annotation. BMC Bioinformatics 15:43.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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