ncbiPMC: Search NCBI PMC database

In cstubben/pmcXML: Tools to parse full text XML documents from PMC Open Access

Description

Searches the Pubmed Central database at NCBI and returns a short citation with author, year, title, journal and published date.

Usage

ncbiPMC(term, ...)

Arguments

term	Entrez search terms or a vector of PMC IDs
...	other options passed to parse_pmc_xml, current defaults are authorsN=3 and journalFull=TRUE

Details

Searches the PMC database and parses the XML returned by E-summary

Value

A data.frame

Author(s)

Chris Stubben

References

http://www.ncbi.nlm.nih.gov/pmc

Examples

## Not run: 
ncbiPMC("PMC2231364")
yp <- ncbiPMC("(YPO0* OR YPO1* OR YPO2* OR YPO3* OR YPO4*) AND (Yersinia[TITLE] OR Yersinia[ABSTRACT]) AND open access[FILTER]")
head(yp)

## End(Not run)

cstubben/pmcXML documentation built on May 14, 2019, 12:25 p.m.