Files in ctlab/LinSeed

Linear Subpsace identification to solve complete gene expression deconvolution problem

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

LICENSE

NAMESPACE

R/RcppExports.R R/datasetLiverBrainLung.R R/dsa.R R/estimateNoise.R R/geneCollapse.R R/generateData.R R/hinge.R R/hysime.R R/linseedObject.R R/plotProportions.R R/preprocess.R R/projectiveProjection.R R/proportionsLiverBrainLung.R R/sisal.R R/softNeg.R R/utils.R R/vca.R Readme.md

Readme_files/figure-markdown_github/deconvolution-1.png

Readme_files/figure-markdown_github/networks-1.png

Readme_files/figure-markdown_github/networks-2.png

Readme_files/figure-markdown_github/proportions-1.png

Readme_files/figure-markdown_github/rtsne-1.png

Readme_files/figure-markdown_github/visi-1.png

data/datasetLiverBrainLung.RData

data/proportionsLiverBrainLung.RData

man/LinseedObject.Rd man/collapseGenes.Rd man/datasetLiverBrainLung.Rd man/dotPlotPropotions.Rd man/estimateAdditiveNoise.Rd man/estimateNoise.Rd man/fastDSA.Rd man/generateMixedData.Rd man/getProjectiveProjection.Rd man/guessOrder.Rd man/hinge.Rd man/hysime.Rd man/is_logscale.Rd man/linearizeDataset.Rd man/logDataset.Rd man/plotProportions.Rd man/preprocessDataset.Rd man/preprocessGSE.Rd man/projectiveProjection.Rd man/proportionsLiverBrainLung.Rd man/pureDsa.Rd man/runDSA.Rd man/sampleFromSimplexUniformly.Rd man/sisal.Rd man/softNeg.Rd man/vca.Rd

src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/fcnnls.cpp

src/fcnnls.h

src/pairwiseR2.cpp

vignettes/linseedTutorial.Rmd

ctlab/LinSeed documentation built on Aug. 9, 2019, 4:33 p.m.