API for ctlab/fgsea
Fast Gene Set Enrichment Analysis

Global functions
.stopf Source code
addGesecaScores Source code
calcGesecaScores Source code
calcGseaStat Man page Source code
calcGseaStatBatch Source code
calcGseaStatBatchCpp Man page Source code
calcGseaStatCumulative Source code
calcGseaStatCumulativeBatch Source code
checkGesecaArgs Source code
collapsePathways Man page
collapsePathwaysGeseca Man page
collapsePathwaysORA Man page Source code
cowplotLabel Source code
cowplotText Source code
exampleExpressionMatrix Man page
examplePathways Man page
exampleRanks Man page
fgsea Man page Source code
fgseaLabel Man page Source code
fgseaMultilevel Man page Source code
fgseaMultilevelCpp Source code
fgseaSimple Man page Source code
fgseaSimpleImpl Man page
fora Man page Source code
geseca Man page Source code
gesecaCpp Source code
gesecaPreparePathways Source code
gesecaSimple Man page Source code
gesecaSimpleImpl Source code
getGesecaLeadingEdge Source code
getGesecaLeadingEdge2 Source code
gmtPathways Man page Source code
mapIdsList Man page Source code
multilevelError Man page Source code
multilevelImpl Man page Source code
plotCoregulationProfile Man page Source code
plotCoregulationProfileReduction Man page Source code
plotCoregulationProfileSpatial Man page Source code
plotEnrichment Man page Source code
plotEnrichmentData Man page Source code
plotGesecaTable Man page Source code
plotGseaTable Man page Source code
preparePathways Source code
preparePathwaysAndStats Source code
reactomePathways Man page Source code
valueToExpExpression Source code
writeGmtPathways Man page Source code
ctlab/fgsea documentation built on Aug. 15, 2024, 10:36 p.m.