writeGmtPathways: Write collection of pathways (list of vectors) to a gmt file
In ctlab/fgsea: Fast Gene Set Enrichment Analysis
writeGmtPathways R Documentation
Write collection of pathways (list of vectors) to a gmt file
Description
Write collection of pathways (list of vectors) to a gmt file
Usage
writeGmtPathways(pathways, gmt.file)
Arguments
pathways
a named list of vectors with gene ids
gmt.file
name of the output file
Examples
data(examplePathways)
writeGmtPathways(examplePathways, tempfile("examplePathways", fileext=".gmt"))
ctlab/fgsea documentation built on Dec. 21, 2024, 1:55 p.m.
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| writeGmtPathways | R Documentation |
Write collection of pathways (list of vectors) to a gmt file
Description
Write collection of pathways (list of vectors) to a gmt file
Usage
writeGmtPathways(pathways, gmt.file)
Arguments
pathways |
a named list of vectors with gene ids |
gmt.file |
name of the output file |
Examples
data(examplePathways)
writeGmtPathways(examplePathways, tempfile("examplePathways", fileext=".gmt"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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