gmtPathways: Returns a list of pathways from a GMT file.
In ctlab/fgsea: Fast Gene Set Enrichment Analysis
gmtPathways R Documentation
Returns a list of pathways from a GMT file.
Description
Returns a list of pathways from a GMT file.
Usage
gmtPathways(gmt.file)
Arguments
gmt.file
Path to a GMT file.
Value
A list of vectors with gene sets.
Examples
pathways <- gmtPathways(system.file(
"extdata", "mouse.reactome.gmt", package="fgsea"))
ctlab/fgsea documentation built on Dec. 21, 2024, 1:55 p.m.
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| gmtPathways | R Documentation |
Returns a list of pathways from a GMT file.
Description
Returns a list of pathways from a GMT file.
Usage
gmtPathways(gmt.file)
Arguments
gmt.file |
Path to a GMT file. |
Value
A list of vectors with gene sets.
Examples
pathways <- gmtPathways(system.file(
"extdata", "mouse.reactome.gmt", package="fgsea"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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