tests/testthat/_snaps/filter_hmmer.md

In currocam/utilsHMMER: HMMERutils

Test that filter hmmer works hits evalue

Code
  .
Output
     hits.evalue
  1      0.0e+00
  2      0.0e+00
  3      3.7e-05
  4      0.0e+00
  5      0.0e+00
  6      2.5e-05
  7      0.0e+00
  8      0.0e+00
  9      2.0e-06
  10     0.0e+00
  11     0.0e+00
  12     0.0e+00
  13     4.4e-04
  14     3.0e-07

Test that filter hmmer works hits domains cevalue

Code
  .
Output
     domains.cevalue
  1          1.8e-04
  2         1.5e-110
  3          2.1e-25
  4          2.2e-04
  5          6.3e-05
  6          7.5e-08
  7          2.6e-29
  8          6.2e-13
  9          4.9e-08
  10         2.0e-30
  11         1.5e-04
  12         1.8e-30
  13         2.9e-09
  14         7.2e-06
  15         4.5e-32
  16         3.1e-10
  17         1.4e-04
  18         1.8e-25
  19         8.2e-07
  20         3.4e-04
  21         2.5e-09
  22         1.2e-04

Test that filter hmmer works hits domains ievalue

Code
  .
Output
     domains.ievalue
  1         1.6e-107
  2          2.2e-22
  3          7.8e-05
  4          2.7e-26
  5          6.5e-10
  6          5.1e-05
  7          2.0e-27
  8          1.9e-27
  9          3.0e-06
  10         4.6e-29
  11         3.2e-07
  12         1.9e-22
  13         2.6e-06

currocam/utilsHMMER documentation built on Feb. 19, 2023, 9:54 p.m.