tests/testthat/test-add_sequences_to_hmmer_tbl.R

testthat::skip("No mocking for add fullseqfasta yet")
testthat::test_that("add fullseqfasta works", {
    search_in_hmmer(
        algorithm = "phmmer",
        seqdb = "pdb",
        seq = ">Seq\nKLRVLGYHNGEWCEAQTKNGQGWVPSNYITPVNSLENSIDKHSWYHGPVSRNAAE"
    ) %>%
        add_sequences_to_hmmer_tbl() %>%
        dplyr::pull("hits.fullfasta") %>%
        testthat::expect_no_error()
})
currocam/utilsHMMER documentation built on Feb. 19, 2023, 9:54 p.m.