selectNodes: Select Nodes

In cytoscape/RCy3: Functions to Access and Control Cytoscape

Select Nodes

Description

Select nodes in the network by SUID, name or other column values.

Usage

selectNodes(
  nodes,
  by.col = "SUID",
  preserve.current.selection = TRUE,
  network = NULL,
  base.url = .defaultBaseUrl
)

Arguments

nodes	List of node SUIDs, names or other column values
by.col	Node table column to lookup up provide node values. Default is 'SUID'.
preserve.current.selection	boolean Whether to maintain previously selected nodes.
network	(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape.
base.url	(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

list of newly selected node SUIDs

Author(s)

AlexanderPico, Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

selectNodes()

cytoscape/RCy3 documentation built on April 7, 2024, 2:17 p.m.