sim: Simulated data
In cz-ye/DECENT: Differential Expression with Capture Efficiency adjustmeNT
sim R Documentation
Simulated data
Description
A simulated dataset for demonstration. 2,944 genes and 500 cells from two groups (224 vs 276).
Usage
sim
Format
A list containing five objects:
data.obs-
a numeric matrix with 2,944 genes and 500 cells: the observed count matrix for endogeneous genes
cell.type-
a numeric vector of length 500: the binary indicator of cellular groups
sp.obs-
a numeric matrix of 50 spike-ins and 500 cells: the observed count matrix for spike-in molecules
sp.true-
a numeric vector of length 50: the true count of spike-ins added into each cell
DE.gene-
a logical vector of length 2,944: whether the gene is actually DE or not.
cz-ye/DECENT documentation built on Jan. 25, 2023, 5:57 a.m.
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| sim | R Documentation |
Simulated data
Description
A simulated dataset for demonstration. 2,944 genes and 500 cells from two groups (224 vs 276).
Usage
sim
Format
A list containing five objects:
data.obs-
a numeric matrix with 2,944 genes and 500 cells: the observed count matrix for endogeneous genes
cell.type-
a numeric vector of length 500: the binary indicator of cellular groups
sp.obs-
a numeric matrix of 50 spike-ins and 500 cells: the observed count matrix for spike-in molecules
sp.true-
a numeric vector of length 50: the true count of spike-ins added into each cell
DE.gene-
a logical vector of length 2,944: whether the gene is actually DE or not.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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