define_steps: Define analysis steps

In daattali/ddpcr: Analysis and Visualization of Droplet Digital PCR in R and on the Web

Define analysis steps

Description

Every ddPCR plate type has an ordered set of steps that are run to analyze the data. When creating a new plate type, if your plate type has different analysis steps than its parent type, you must define this function to return a named list of the analysis steps. When defining this function, you can use NextMethod("define_steps") to get a list of the steps available in the parent type if you want to simply add new steps without defining all of them.

Usage

define_steps(plate)

Arguments

plate

A ddPCR plate

Value

A named list of analysis steps in the order they should be run on a dataset. The name of each item in the list is the human-readable name of the step and the value of each item is the function to call to perform the step.

See Also

steps
step_begin
step_end
parent_plate_type
define_clusters
define_params

daattali/ddpcr documentation built on March 27, 2024, 6:50 a.m.