check_names | 'check_names' to check plant species names in Wisconsin for... |
comm_a | Example community data |
comm_b | #' Example community data |
cscore_site | 'cscore_site' to calculate C-score for each site. |
dist_to_df | 'dist_to_df' convert a distance class object or a matrix to a... |
get_pd_alpha | calculate alpha phylogenetic diversity |
get_pd_beta | calculate pairwise beta phylogenetic diversity |
logit_tran | 'logit_tran' to conduct logit-transformation. |
multiplot | 'multiplot' to put ggplot objects in multiple panels |
mvpd | calculate MPD and VPD (mean and variance of pairwise... |
panel.cor | 'panel.cor' to plot absolute value of correlations |
panel.hist | 'panel.hist' to plot absolute value of correlations |
pcd2 | pairwise site phylogenetic community dissimilarity (PCD)... |
pcd_pred | Predicted PCD with species pool |
pd2 | Faith's PD |
phylo_betapart | Phylogenetic beta diversity partition |
rand_test | Randomization tests |
rm_site_noobs | 'rm_site_noobs' remove site that has no obsrevations of any... |
rm_sp_noobs | 'rm_sp_noobs' remove species that not observed in any site. |
simpleCap | 'simpleCap' to make the first letter to be upper case. |
tnrs_match_names_2 | match taxa names with the Open Tree of Life |
tree | #' Example phylogeny |
unifrac2 | unifrac |
var_to_rownames | 'var_to_rownames' convert a column of a data frame to be row... |
wide_by_site | Change long table into wide table for each site |
wide_by_site_rarefy | 'wide_by_site_rarefy' to resample quadrats from survey data |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.