getCNArmSummary: Make a table of CN summary stats per chromosome arm
In dakl/clinseqr: Function used to analyze data in the clinseq project
Description
Usage
Arguments
Value
Examples
Description
Make a table of CN summary stats per chromosome arm
Usage
1
getCNArmSummary(segments, bandsFile)
Arguments
segments
Data table with segments from qdnaseq.
bandsFile
Path to cytobands.txt (see repo dakl/genome at github)
Value
A summary table per chromosome arm
Examples
1
#getCNArmSummary(segments, bandsFile = "cytobands.txt")
dakl/clinseqr documentation built on May 14, 2019, 3:30 p.m.
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Description Usage Arguments Value Examples
Description
Make a table of CN summary stats per chromosome arm
Usage
1 | getCNArmSummary(segments, bandsFile)
|
Arguments
segments |
Data table with segments from qdnaseq. |
bandsFile |
Path to cytobands.txt (see repo dakl/genome at github) |
Value
A summary table per chromosome arm
Examples
1 | #getCNArmSummary(segments, bandsFile = "cytobands.txt")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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