getRNAseqMetrics: Get normalized gene body coverage for reports
In dakl/clinseqr: Function used to analyze data in the clinseq project
Description
Usage
Arguments
Value
Examples
Description
Get normalized gene body coverage for reports
Usage
1
getRNAseqMetrics(reports, src = "RNASEQ_RNASEQ_METRICS")
Arguments
reports
data frame with reports
src
string with name of column name to use (from reports)
Value
A data frame with normalized gene body coverage for all samples
Examples
1
2
3
4
#dat <- getRNAseqMetrics(reports)
#ggplot(subset(dat, METRIC=="PCT_RIBOSOMAL_BASES"),
# aes(x=DataReportID, y=VALUE, fill=DataReportID)) +
#geom_bar(stat="identity")
dakl/clinseqr documentation built on May 14, 2019, 3:30 p.m.
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Description Usage Arguments Value Examples
Description
Get normalized gene body coverage for reports
Usage
1 | getRNAseqMetrics(reports, src = "RNASEQ_RNASEQ_METRICS")
|
Arguments
reports |
data frame with reports |
src |
string with name of column name to use (from reports) |
Value
A data frame with normalized gene body coverage for all samples
Examples
1 2 3 4 | #dat <- getRNAseqMetrics(reports)
#ggplot(subset(dat, METRIC=="PCT_RIBOSOMAL_BASES"),
# aes(x=DataReportID, y=VALUE, fill=DataReportID)) +
#geom_bar(stat="identity")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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