activity_trend: Plot animal activity trends.

In dapperstats/MAVEn: A Worflow Pipeline for Processing MAVEn Datasets

Description

activity_trend graphcially displays the animal activity data by chamber. The data are adjusted to a standardized measurement reading for illustration.

Usage

activity_trend(
  animal_activity,
  maven_experiment = "",
  outdir = NULL,
  out_filename = "ActivityTrends",
  out_filetype = ".png",
  activity_baseline = ""
)

Arguments

animal_activity	animal activity dataframe extracted from the MAVEn without baseline using extract_activity.
maven_experiment	Experiment name. Applied to both figures and files.
outdir	Folder where figure should be stored.
out_filename	Figure name.
out_filetype	Figure file type.
activity_baseline	Baseline value for data inclusion.

Value

Plot of standardized activity readings for each cycle within each chamber for selected interval.

Examples

#activity_trend(animal_activity, maven_experiment = "experiment_name")

dapperstats/MAVEn documentation built on Jan. 22, 2021, 3:39 p.m.