maven_datatable: Create final MAVEn datatable for an experimental run
In dapperstats/MAVEn: A Worflow Pipeline for Processing MAVEn Datasets

Description Usage Arguments Value Examples

Create final MAVEn datatable for an experimental run

maven_datatable(
  metabolism_summary_cycle,
  activity_summary_cycle,
  outdir = NULL,
  out_filename = "ExperimentSummaryTable",
  maven_experiment = experiment_name
)

`metabolism_summary_cycle`	Dataframe calculated by `summarize_metabolism` with the "by_cycle" type indicated.
`activity_summary_cycle`	Dataframe calculated by `summarize_activity` with the "by_cycle" type indicated.
`outdir`	Output directory. Defaults to 'output'
`out_filename`	File name. Defaults to "ExperimentSummaryTable"
`maven_experiment`	MAVEn experiment name.

Table with calculated median metabolism and activity by cycle.

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#maven_datatable(metabolism_summary_cycle, activity_summary_cycle, 
#outdir = "output", out_filename = "ExperimentSummaryTable", 
#maven_experiment = "experiment")

dapperstats/MAVEn documentation built on Jan. 22, 2021, 3:39 p.m.