brcaMetadata: A data.frame with patient metadata for breast cancer...
In databio/COCOA: Coordinate Covariation Analysis
brcaMetadata R Documentation
A data.frame with patient metadata for breast
cancer patients.
Description
Has metadata for patients for which DNA methylation
or chromatin accessibility data was included as package data (329 patients).
Rows are patients,
with TCGA patient identifiers as row names and the column "subject_ID".
Also includes columns: ER_status, ER_percent, age_diagnosis, days_to_death,
and days_to_last_follow_up.
Metadata is from The Cancer Genome Atlas
(TCGA-BRCA, https://portal.gdc.cancer.gov/).
Usage
data(brcaMetadata)
Format
A data.frame object
databio/COCOA documentation built on Sept. 1, 2023, 5:50 p.m.
R Package Documentation
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| brcaMetadata | R Documentation |
A data.frame with patient metadata for breast cancer patients.
Description
Has metadata for patients for which DNA methylation or chromatin accessibility data was included as package data (329 patients). Rows are patients, with TCGA patient identifiers as row names and the column "subject_ID". Also includes columns: ER_status, ER_percent, age_diagnosis, days_to_death, and days_to_last_follow_up. Metadata is from The Cancer Genome Atlas (TCGA-BRCA, https://portal.gdc.cancer.gov/).
Usage
data(brcaMetadata)
Format
A data.frame object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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