simulateNetwork: Simulate a threshold PBN.

In davidkwca/inferTPBN: Infer Threshold PBNs from Timeseries Data.

Description

From a given starting configurations, simulate the network Emax times for Tmax steps in every single timeseries.

Usage

simulateNetwork(net, Tmax, Emax, start = "random", start.values,
  fix.genes = -1, fix.values = -1)

Arguments

net	The network from which the timeseries is generated.
Tmax	The number of time points per timeseries.
Emax	The number of timeseries.
start	If "random", gene values are initialized randomly.
start.values	If start is not "random" these start values are used.
fix.genes	Vector of genes to be kept fixed at a certain level.
fix.values	Vector of values at which genes should be fixed.

Value

A list of timeseries.

Examples

net <- createNetwork(inputProbabilities=1, 5, 2, "homogeneous")
ts.multi <- simulateNetwork(net, 10, 50) # Creates 50 timeseries à 10 points

davidkwca/inferTPBN documentation built on May 9, 2019, 12:53 p.m.