two_dimensional <- c( "diff_genes", "limma_probe_table",
"annotated_exprs_matrix", "expression_matrix",
"annotation_table", "edgeR_deg_table", "count_matrix",
"added_genes", "frequency_table", "jaccard_table",
"info_table", "correlation_to_trait_table",
"module_p_values", "color_vector", "ppi_table")
non_ppi_methods <- c("MODA", "DiffCoEx", "WGCNA")
ppi_methods <- c("Correlation_clique", "DIAMOnD", "Mcode", "module_discoverer")
ppi_db_methods <- c("Clique_Sum_permutation", "Clique_Sum_exact")
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