Description Usage Arguments Value Author(s)

Compute the F score, max diff ratio difference and transcripts that change the most. Additionally, it can compute a P-value to assess the significance of the F score.

1 | ```
compFscore(geno.df, tre.mt, svQTL = FALSE, asympt = TRUE, res = FALSE)
``` |

`geno.df` |
a data.frame of one row with the genotype information for each sample. |

`tre.mt` |
a matrix with the transcript relative expression (samples x transcripts). |

`svQTL` |
should svQTL test be performed in addition to sQTL. Default is |

`asympt` |
should significance for the F score (sQTL test) be computed using
the |

`res` |
is |

A data.frame with columns:

`F` |
the F score. |

`nb.groups` |
the number of genotype groups. |

`md` |
the maximum difference in splicing ratios between genotype groups. |

`tr.first, tr.second` |
the two transcripts that change the most. |

`info` |
comma separated list with the number of individuals per genotype group: -1,0,1,2. |

`pv` |
if |

Diego Garrido-Martín, Jean Monlong

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