sQTLseekeR2-package: sQTLseekeR2: R package for splicing QTL mapping

Description Details Author(s) References See Also


sQTLseekeR2 tests for association between genetic variants and alternative splicing (relative transcript abundances of a gene measured from RNA-seq), using a multivariate non-parametric approach. It is an enhanced version of sQTLseekeR (see Details).


Main enhancements in sQTLseekeR2:


Diego Garrido-Martín, Jean Monlong, Miquel Calvo, Ferran Reverter, Roderic Guigó


Garrido-Martín, D. et al. Identification and analysis of splicing quantitative trait loci across multiple tissues in the human genome. Nat Commun 12, 727 (2021). https://doi.org/10.1038/s41467-020-20578-2

See Also

Useful links:

dgarrimar/sQTLseekeR2 documentation built on Nov. 22, 2021, 3:23 a.m.