CompareTopColumns: Create a graph comparing the top n columns (in terms of...
In dgrtwo/GSEAMA: Gene set enrichment analysis made awesome
Description
Usage
Arguments
Details
Description
Plot a bocplot, violin plot, or faceted histogram with the distributions
of y within the most associated gene sets.
Usage
1
CompareTopColumns(m, n = 9, ...)
Arguments
m
GeneMatrix object
n
Number of genes to compare
...
Additional arguments to be passed to CompareY
Details
Most methods ("t.test", "wilcoxon", "hypergeometric") use the
p-value to find the most significant columns. The "lasso" uses the order
in which the terms were added to the regression
dgrtwo/GSEAMA documentation built on May 15, 2019, 7:22 a.m.
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Description Usage Arguments Details
Description
Plot a bocplot, violin plot, or faceted histogram with the distributions of y within the most associated gene sets.
Usage
1 | CompareTopColumns(m, n = 9, ...)
|
Arguments
m |
GeneMatrix object |
n |
Number of genes to compare |
... |
Additional arguments to be passed to CompareY |
Details
Most methods ("t.test", "wilcoxon", "hypergeometric") use the p-value to find the most significant columns. The "lasso" uses the order in which the terms were added to the regression
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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