find_minimal_rooted_tree: Find Minimal Rooted Tree
In dgrtwo/GSEAMA: Gene set enrichment analysis made awesome
Description
Usage
Arguments
Value
Description
Removes all loops so that gene sets can be nested within one another: creates an optimal directed acyclic graph
pointing from general GO terms down to specific ones.
Usage
1
find_minimal_rooted_tree(nodes, edges)
Arguments
nodes
data_frame significance of gene sets
edges
data_frame go_id1 are parents of go_id2
Value
an igraph object of the gene set minimal spanning tree
dgrtwo/GSEAMA documentation built on May 15, 2019, 7:22 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Removes all loops so that gene sets can be nested within one another: creates an optimal directed acyclic graph pointing from general GO terms down to specific ones.
Usage
1 | find_minimal_rooted_tree(nodes, edges)
|
Arguments
nodes |
data_frame significance of gene sets |
edges |
data_frame go_id1 are parents of go_id2 |
Value
an igraph object of the gene set minimal spanning tree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.