plot_tree_freq: Plots tree branch frequency histogram
In dhelekal/CaveDive: Phylodynamics for Clonal Expansion
View source: R/plot_expansions.R
plot_tree_freq R Documentation
Plots tree branch frequency histogram
Description
Plots tree branch frequency histogram
Usage
plot_tree_freq(
mcmc.df,
event.df,
pre,
prior_t_given_N = NULL,
highlight_node = NULL,
MRCA_lab = c()
)
Arguments
mcmc.df
mcmc.df returned by mcmc2data.frame
event.df
event.df returned by mcmc2data.frame
pre
Preprocessed phylogeny
prior_t_given_N
(Optional) Expansion time prior. If supplied prior will be overlayed.
highlight_node
(Optional) Node to highlight
Value
a plot object
dhelekal/CaveDive documentation built on June 11, 2024, 4:32 p.m.
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View source: R/plot_expansions.R
| plot_tree_freq | R Documentation |
Plots tree branch frequency histogram
Description
Plots tree branch frequency histogram
Usage
plot_tree_freq(
mcmc.df,
event.df,
pre,
prior_t_given_N = NULL,
highlight_node = NULL,
MRCA_lab = c()
)
Arguments
mcmc.df |
mcmc.df returned by mcmc2data.frame |
event.df |
event.df returned by mcmc2data.frame |
pre |
Preprocessed phylogeny |
prior_t_given_N |
(Optional) Expansion time prior. If supplied prior will be overlayed. |
highlight_node |
(Optional) Node to highlight |
Value
a plot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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