prepareAnnotatedIntronRanges: Prepare the annotated intron ranges for the annotating txdb...
In dnzdmrcgl/proActivTest: Estimate Promoter Activity from RNA-Seq data

Description Usage Arguments Value Examples

Prepare the annotated intron ranges for the annotating txdb specified

1 2	prepareAnnotatedIntronRanges(txdb, species = "Homo_sapiens", promoterIdMapping)

`txdb`	A txdb object. The txdb object of the annotation version for which promoters will be identified
`species`	A character object. The genus and species of the organism to be used in keepStandardChromosomes(). Supported species can be seen with names(genomeStyles()).
`promoterIdMapping`	A data.frame object. The id mapping between transcript ids, names, TSS ids, promoter ids and gene ids

A GRanges object. The intron ranges annotated with the promoter information.

## Not run: 
intronRanges.annotated <- prepareAnnotatedIntronRanges(txdb,
                                                       species = 'Homo_sapiens',
                                                       promoterIdMapping)

## End(Not run)