Description Usage Arguments Value Examples
Retrieve promoter coordinates (TSS) for each promoter with gene id and internal promoter state
1 |
exonReducedRanges |
A GRanges object. The reduced first exon ranges for each promoter without metadata |
promoterIdMapping |
A data.frame object. The id mapping between transcript ids, names, TSS ids, promoter ids and gene ids |
A GRanges object. Promoter coordinates (TSS) with gene id and internal promoter state
1 2 3 4 5 | ## Not run:
promoterCoordinates <- preparePromoterCoordinates(exonReducedRanges,
promoterIdMapping)
## End(Not run)
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