preparePromoterIdMapping: Prepare the id mapping between transcript ids, names, TSS...
In dnzdmrcgl/proActivTest: Estimate Promoter Activity from RNA-Seq data

Description Usage Arguments Value Examples

Prepare the id mapping between transcript ids, names, TSS ids, promoter ids and gene ids

1 2	preparePromoterIdMapping(txdb, species = "Homo_sapiens", exonReducedRanges)

`txdb`	A txdb object. The txdb object of the annotation version for which promoters will be identified
`species`	A character object. The genus and species of the organism to be used in keepStandardChromosomes(). Supported species can be seen with names(genomeStyles()).
`exonReducedRanges`	A GRanges object. The reduced first exon ranges for each promoter

A data.frame object. The id mapping between transcript ids, names, TSS ids, promoter ids and gene ids

## Not run: 
promoterIdMapping <- preparePromoterIdMapping(txdb,
                                               species = 'Homo_sapiens',
                                               exonReducedRanges)

## End(Not run)