Qagr_pericarp_genotypes: Coast live oak (Quercus agrifolia) pericarp microsatellite...

In douglasgscofield/readGenalex: Read, Write, Manipulate and Convert GenAlEx-Format Genotype Files

Description

This data set contains one annotated data frame of class genalex, holding 10-locus diploid microsatellite genotypes of 568 pericarps (outer seed coats) from coast live oak (Quercus agrifolia) acorns collected from 17 acorn woodpecker (Melanerpes formicivorus) granaries at Sedgwick Reserve, Santa Barbara County, California, USA.

Format

Annotated data frames of class genalex. Columns are:

PericarpID	Identifier for sampled pericarp
Granary	Granary from which the pericarp was collected
0c11	First allele for microsatellite locus 0c11
0c11.2	Second allele for microsatellite locus 0c11
...	Remaining 9 microsatellite genotypes

Details

These data have been analysed in several published papers, and are also publicly available at the Dryad Digital Repository. If using these data, please cite the original paper as well as the data, as shown below.

Source

http://datadryad.org/resource/doi:10.5061/dryad.40kq7

References

Scofield DG, Smouse PE, Karubian J, Sork VL (2012) Use of alpha, beta, and gamma diversity measures to characterize seed dispersal by animals. The American Naturalist 180(6): 719-732. http://dx.doi.org/10.1086/668202

Scofield DG, Smouse PE, Karubian J, Sork VL (2012) Data from: Use of alpha, beta, and gamma diversity measures to characterize seed dispersal by animals. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.40kq7

https://github.com/douglasgscofield/readGenalex

douglasgscofield/readGenalex documentation built on May 15, 2019, 10:43 a.m.