Man pages for drashley/InvertR
Finds putative inversions in Strand-seq sequencing data
| collapseStrands | Collapse ratioFile and generate bedGraph |
| countFreqs | Calculate wcRatios for strandTable |
| findROILocation | finds ROI locations in collapsed wcRatio file |
| plotGaps | Plots gaps in output png |
| plotROIFrequencies | Generates plot of wcRatios |
| processBam | Processes input bamfile |
| processBed | Processes input befile |
| runInvertR | Wrapper function for InvertR |
