countFreqs: Calculate wcRatios for strandTable
In drashley/InvertR: Finds putative inversions in Strand-seq sequencing data
Description
Usage
Arguments
Author(s)
Description
Calculate wcRatios for input bedfile using a read-based sliding window of checkNum size
Usage
1
countFreqs(strandTable, checkNum = 10, verbose = TRUE)
Arguments
strandTable
a dataframe object of sequencing reads
checkNum
Window size used to calculate wcRatios
verbose
Verbose messages if TRUE.
Author(s)
Ashley D. Sanders, Mark Hills
drashley/InvertR documentation built on May 15, 2019, 1:54 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Author(s)
Description
Calculate wcRatios for input bedfile using a read-based sliding window of checkNum size
Usage
1 | countFreqs(strandTable, checkNum = 10, verbose = TRUE)
|
Arguments
strandTable |
a dataframe object of sequencing reads |
checkNum |
Window size used to calculate wcRatios |
verbose |
Verbose messages if |
Author(s)
Ashley D. Sanders, Mark Hills
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.