collapseStrands: Collapse ratioFile and generate bedGraph
In drashley/InvertR: Finds putative inversions in Strand-seq sequencing data
Description
Usage
Arguments
Author(s)
Description
Collapse space between values in ratioFile that are consecutive, with bedGraph format option
Usage
1
collapseStrands(ratioFile, fileName, verbose = TRUE, asBedgraph = FALSE)
Arguments
ratioFile
A dataframe with wcRatio coordinates.
fileName
Identifier used in bedgraph header
verbose
Verbose messages ifTRUE
asBedgraph
ifTRUE Formates output file as bedgraph
Author(s)
Ashley D. Sanders, Mark Hills
drashley/InvertR documentation built on May 15, 2019, 1:54 p.m.
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Description Usage Arguments Author(s)
Description
Collapse space between values in ratioFile that are consecutive, with bedGraph format option
Usage
1 | collapseStrands(ratioFile, fileName, verbose = TRUE, asBedgraph = FALSE)
|
Arguments
ratioFile |
A dataframe with wcRatio coordinates. |
fileName |
Identifier used in bedgraph header |
verbose |
Verbose messages if |
asBedgraph |
if |
Author(s)
Ashley D. Sanders, Mark Hills
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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